Genotyping / sequencing tools and services toolbox

Access to faster and cheaper genotyping and sequencing services, combined with support and training, have the potential to accelerate the rate at which new varieties can be developed. The genotyping / sequencing toolbox provides all the details needed to make use of the EiB low- and mid-density genotyping services.

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Recent entries

Services
Genotyping panel containing 2,432 SNP markers distributed evenly throughout the 20 chromosomes of yam (Dioscorea spp). This panel suits marker-assisted breeding, diversity analyses, genomic prediction and germplasm management applications.
Services
Genotyping panel containing 3,210 SNP markers distributed evenly throughout the 15 chromosomes of sweet potato (Ipomoea batatas L.)
Tools
Through the CGIAR Service Portal, registered partners can access a variety of services related to crop breeding and research.
Services
The mid-density genotyping panel for maize consists of 3305 genome-wide markers. The panel enables genomic selection, QTL mapping and fingerprinting of elite material, QC, estimating background genome recovery in genomics-assisted breeding, genetic diversity, and germplasm management applications.
Services
Genotyping panel containing 2000 SNP markers distributed across 11 chromosomes. Suitable for estimating background genome recovery, selection with traits associated markers in genomics-assisted breeding, genetic diversity and germplasm management applications.
Services
Marker panel with 3,900 SNP markers distributed across the 21 bread wheat (Triticum aestivum L.) chromosomes. Suitable for diversity studies and genomic selection.
Services
The 1k RiCA mid-density genotyping panel for rice consists of roughly 800 genome-wide marker, 22 quality-control markers and up to 200 trait markers distinguishing 87 high-value genes and QTLs. The panel enables genomic selection, variety typing, QTL mapping and fingerprinting of elite material.