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Breeding for Tomorrow (B4T) has developed a set of tools to standardize data management and analysis of its programs.
4k-RiCA: An Upgraded Mid-Density Genotyping Panel for Global Rice Breeding Efforts
The 4K RiCA is a high-quality mid- density genotyping panel for rice currently consisting of 3750 variants (on the DArTaG platform) distributed evenly throughout the 12 chromosomes of the rice genome. This panel has been developed to accelerate global genomic-assisted rice improvement programs.
EiB genotyping services
HaploPanel is a next-generation, functionally haplotype-based genotyping platform developed for precision rice breeding at the International Rice Research Institute (IRRI SA Hub, Hyderabad, India). Unlike conventional SNP arrays that rely on randomly distributed markers, every marker in HaploPanel is anchored to a functionally characterized and cloned rice gene. Genotyping is offered through Diversity Arrays Technology Pty Ltd (DArT P/L, Canberra, Australia) using the DArTag targeted genotyping platform. BLAST alignments were performed against the Oryza sativa Nipponbare reference genome (v7.0) to confirm locus specificity.
EiB genotyping services
Marker panel with 4065 SNP markers distributed across the 11 Banana and Plantain (Musa spp) chromosomes. Suitable for diversity studies and genomic selection.
EiB genotyping services
The LGC Flex-Seq Maize 5K SNP Panel is a high-quality, mid-density genotyping platform jointly developed by the International Maize and Wheat Improvement Center (CIMMYT) and the International Institute of Tropical Agriculture (IITA) to accelerate the routine implementation of genomics-assisted breeding in maize improvement programs worldwide.
EiB genotyping services
The initial set of finger millet mid-density panel was developed using 3,730 SNP markers validated on 470 diverse finger millet accessions including 182 African and 288 Asian lines. A total of 2,606 SNPs (69.9%) with robust performance were retained.
EiB genotyping services
This mid-density genotyping panel is suitable for genomic selection, MAS, and germplasm diversity studies.
EiB genotyping services