High-throughput genotyping services (HTPG)

Low-cost access to world class genotyping services for CGIAR and partner breeding centers working on the majority of CGIAR mandate crops.

High Throughput Genotyping Services (HTPG) is a shared KASPTM genotyping platform serving all CGIAR centers and their partner programs.

HTPG is established to provide low-cost and world class genotyping services to breeding programs working on the majority of CGIAR mandate crops. Current participating crops include Maize, Rice, Wheat, Groundnut, Chickpea, Pigeon Pea, Pearl Millet, Finger Millet, Sorghum, Potato, Common Bean, Cowpea, Cassava.

We work with global-level service providers with ISO certified labs to ensure that the HTPG community has access to the high-quality data return crucial to timely decision-making. This approach puts HTPG genotyping quality and cost on par with many elite private sector companies at around US $1-5 per sample with 10+ markers, significantly cheaper than in-house solutions.

 

 
Archive
HTPG pricing structure
Describes costs according to sample batch size.
High-throughput Genotyping Platform
Archive
Intertek order documentation
Order form and import clearance for samples.
Intertek
Manual
Intertek sampling guide
General instructions for sampling leaf tissue for SNP analysis.
Intertek
Archive
HTPG contact list
Up-to-date list of HTPG contacts
Milcah Kigoni
Manual
Genotype grid file to Flapjack conversion guide
Use Galaxy to import HTPG workflow and export data to Flapjack.
Milcah Kigoni
Manual
HTPG sample file and Intertek order form guide
Use Galaxy to obtain the HTPG sample file and Intertek order form.
Milcah Kigoni
Detailed description of HTPG-supported markers for: durable disease resistance, multiple rust resistance, dwarfing and grain protein.
Manilal William